Stem-loop eca-mir-582

Accession

MI0012852

Description

Equus caballus eca-mir-582 precursor miRNA

Sequence

6286 reads, 15.0 reads per million, 131 experiments

uuuggUUACAGUUGUUCAACCAGUUACUaaucuaacuaauugUAACCGGUUGAACAACUGAACCCaaa
...((((.(((((((((((((.(((((..............))))).)))))))))))))))))....

Structure

-uuu    A             A     Uaaucu 
    ggUU CAGUUGUUCAACC GUUAC      a
    |||| ||||||||||||| |||||       
    CCAA GUCAACAAGUUGG CAAUg      a
aaaC    -             C     uuaauc 

Annotation confidence High

Genome context

21: 13877217-13877284 [+]

Mature eca-miR-582-5p

• Accession: MIMAT0013103
• Description: Equus caballus eca-miR-582-5p mature miRNA
• Sequence: 6 - UUACAGUUGUUCAACCAGUUACU - 28
• Evidence: not_experimental

Mature eca-miR-582-3p

• Accession: MIMAT0013104
• Description: Equus caballus eca-miR-582-3p mature miRNA
• Sequence: 43 - UAACCGGUUGAACAACUGAACCC - 65
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131