Stem-loop eca-mir-103

Accession

MI0012854

Description

Equus caballus eca-mir-103 precursor miRNA

Literature search

9 open access papers mention eca-mir-103
(23 sentences)

Sequence

2295338 reads, 4803.0 reads per million, 238 experiments

ucgugcuuucAGCUUCUUUACAGUGCUGCCUUGuagcauucaggucaAGCAGCAUUGUACAGGGCUAUGAaagaacca
..((.(((((((((.((.(((((((((((.(((.(.(.....).))))))))))))))).)))))..)))))).))..

Structure

uc  g      --   U  U           C   u g a 
  gu cuuucA  GCU CU UACAGUGCUGC UUG a c u
  || ||||||  ||| || ||||||||||| ||| | | u
  ca gaaAGU  CGG GA AUGUUACGACG Aac u g c
ac  a      AU   -  C           -   - g a 

Annotation confidence High

Genome context

22: 19479868-19479945 [-]

Mature eca-miR-103-5p

• Accession: MIMAT0051430
• Description: Equus caballus eca-miR-103-5p mature miRNA
• Sequence: 11 - AGCUUCUUUACAGUGCUGCCUUG - 33
• Evidence: not_experimental

Mature eca-miR-103-3p

• Accession: MIMAT0013105
• Description: Equus caballus eca-miR-103-3p mature miRNA
• Sequence: 48 - AGCAGCAUUGUACAGGGCUAUGA - 70
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131