Stem-loop eca-mir-133a-2

Accession

MI0012856

Description

Equus caballus eca-mir-133a-2 precursor miRNA

Literature search

5 open access papers mention eca-mir-133a-2
(8 sentences)

Sequence

116225655 reads, 70369.0 reads per million, 172 experiments

gcuaaAGCUGGUAAAAUGGAACCAAAUcaacuguucaauggaUUUGGUCCCCUUCAACCAGCUGuagc
((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))

Structure

    a       AA  U  A        aacug 
gcua AGCUGGU  AA GG ACCAAAUc     u
|||| |||||||  || || ||||||||      
cgau UCGACCA  UU CC UGGUUUag     u
    G       AC  C  C        guaac 

Annotation confidence High

Genome context

22: 49417696-49417763 [+]

Mature eca-miR-133a-2-5p

• Accession: MIMAT0051374
• Description: Equus caballus eca-miR-133a-2-5p mature miRNA
• Sequence: 6 - AGCUGGUAAAAUGGAACCAAAU - 27
• Evidence: not_experimental

Mature eca-miR-133a-3p

• Accession: MIMAT0012997
• Description: Equus caballus eca-miR-133a-3p mature miRNA
• Sequence: 43 - UUUGGUCCCCUUCAACCAGCUG - 64
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131