Stem-loop eca-mir-873

Accession

MI0012871

Description

Equus caballus eca-mir-873 precursor miRNA

Sequence

46 reads, 7 reads per million, 1 experiments

gugugcauuuGCAGGAACUUGUGAGUCUCCUauugaaaaugaacaggagacugaugaguucccgggaacacccacaa
(((.(..(((.(.(((((((((.((((((((.((.......)).)))))))).))))))))).).)))..).)))..

Structure

--   u ca   G A         G        a  ga 
  gug g  uuu C GGAACUUGU AGUCUCCU uu  a
  ||| |  ||| | ||||||||| |||||||| ||  a
  cac c  aag g ccuugagua ucagagga aa  a
aa   c ac   g c         g        c  gu 

Annotation confidence High

Genome context

chr23: 46420618-46420694 [-]

Mature eca-miR-873

• Accession: MIMAT0013120
• Description: Equus caballus eca-miR-873 mature miRNA
• Sequence: 11 - GCAGGAACUUGUGAGUCUCCU - 31
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131