Stem-loop eca-mir-876

Accession

MI0012872

Description

Equus caballus eca-mir-876 precursor miRNA

Literature search

1 open access papers mention eca-mir-876
(1 sentences)

Sequence

208 reads, 3.0 reads per million, 56 experiments

ugaagugcugUGGAUUUCUUUGUGAAUCACCauaucugagcuaauguggUGGUGGUUUACAAAGUAAUUCAuagugcuuca
((((((((((((((((.((((((((((((((((..(.........)..)))))))))))))))).))))))))))))))))

Structure

                U                au uga 
ugaagugcugUGGAUU CUUUGUGAAUCACCau  c   g
|||||||||||||||| ||||||||||||||||  |   c
acuucgugauACUUAA GAAACAUUUGGUGGUg  g   u
                U                gu uaa 

Annotation confidence High

Genome context

23: 46211997-46212077 [-]

Mature eca-miR-876-5p

• Accession: MIMAT0013121
• Description: Equus caballus eca-miR-876-5p mature miRNA
• Sequence: 11 - UGGAUUUCUUUGUGAAUCACC - 31
• Evidence: experimental ; Illumina [1]

Mature eca-miR-876-3p

• Accession: MIMAT0013122
• Description: Equus caballus eca-miR-876-3p mature miRNA
• Sequence: 50 - UGGUGGUUUACAAAGUAAUUCA - 71
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131