Stem-loop eca-mir-369

Accession

MI0012886

Description

Equus caballus eca-mir-369 precursor miRNA

Sequence

467 reads, 71 reads per million, 1 experiments

uugaagggAGAUCGACCGUGUCAUAUUCGCuuuauugacuucgAAUAAUACAUGGUUGAUCUUUucucgg
.(((.((((((((((((((((..((((((............))))))..)))))))))))))))).))).

Structure

u   a                CA      Cuuua 
 uga gggAGAUCGACCGUGU  UAUUCG     u
 ||| ||||||||||||||||  ||||||      
 gcu uUUUCUAGUUGGUACA  AUAAgc     u
g   c                UA      uucag 

Annotation confidence High

Genome context

chr24: 42935933-42936002 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from eca-mir-369

Mature eca-miR-369-5p

• Accession: MIMAT0013140
• Description: Equus caballus eca-miR-369-5p mature miRNA
• Sequence: 9 - AGAUCGACCGUGUCAUAUUCGC - 30
• Evidence: not_experimental

Mature eca-miR-369-3p

• Accession: MIMAT0013141
• Description: Equus caballus eca-miR-369-3p mature miRNA
• Sequence: 44 - AAUAAUACAUGGUUGAUCUUU - 64
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131