Stem-loop eca-mir-376c

Accession

MI0012890

Description

Equus caballus eca-mir-376c precursor miRNA

Sequence

37 reads, 6 reads per million, 1 experiments

aaaagguggauauuccuucuauguuuauguuguuuaugguuaAACAUAGAGGAAAUUCCACGUuuu
((((.(((((..(((((.(((((((((.............))))))))))))))..))))).))))

Structure

    g     ua     u         uguug 
aaaa gugga  uuccu cuauguuua     u
|||| |||||  ||||| |||||||||     u
uuuU CACCU  AAGGA GAUACAAau     u
    G     UA     -         uggua 

Annotation confidence Not enough data

Genome context

chr24: 42911104-42911169 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from eca-mir-376c

Mature eca-miR-376c

• Accession: MIMAT0013145
• Description: Equus caballus eca-miR-376c mature miRNA
• Sequence: 43 - AACAUAGAGGAAAUUCCACGU - 63
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131