Stem-loop eca-mir-381

Accession

MI0012894

Description

Equus caballus eca-mir-381 precursor miRNA

Sequence

133 reads, 20 reads per million, 1 experiments

uacuuaaagcgagguugcccuuuguauauucgguuuauugacauagaaUAUACAAGGGCAAGCUCUCUGUgagua
((((((.((.(((.((((((((.((((((((.(((....)))...)))))))))))))))).))).)).))))))

Structure

      a  c   g        u        --g   u 
uacuua ag gag uugcccuu guauauuc   guu a
|||||| || ||| |||||||| ||||||||   |||  
augagU UC CUC AACGGGAA CAUAUaag   cag u
      G  U   G        -        aua   u 

Annotation confidence Not enough data

Genome context

chr24: 42916054-42916128 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from eca-mir-381

Mature eca-miR-381

• Accession: MIMAT0013149
• Description: Equus caballus eca-miR-381 mature miRNA
• Sequence: 49 - UAUACAAGGGCAAGCUCUCUGU - 70
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131