Stem-loop eca-mir-487a

Accession

MI0012904

Description

Equus caballus eca-mir-487a precursor miRNA

Sequence

250 reads, 38 reads per million, 1 experiments

gguacuugaagagugguuaucccugcuguguucgcuguauuuaugacgAAUCAUACAGGGACAUCCAGUUuuucaguauc
((((((.(((((.(((...((((((.(((((((((.........).)))).))))))))))...))).))))).))))))

Structure

      u     g   uua      c    -    - ugu 
gguacu gaaga ugg   ucccug ugug uucg c   a
|||||| ||||| |||   |||||| |||| |||| |   u
cuauga uuuUU ACC   AGGGAC AUAC AAgc g   u
      c     G   UAC      -    U    a uau 

Annotation confidence Not enough data

Genome context

chr24: 42921992-42922071 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from eca-mir-487a

Mature eca-miR-487a

• Accession: MIMAT0013161
• Description: Equus caballus eca-miR-487a mature miRNA
• Sequence: 49 - AAUCAUACAGGGACAUCCAGUU - 70
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131