Stem-loop eca-mir-487b

Accession

MI0012905

Description

Equus caballus eca-mir-487b precursor miRNA

Sequence

646 reads, 98 reads per million, 1 experiments

uugguacuuggagagugguuaucccuguccuguucguuuuaauuacgucgAAUCGUACAGGGUCAUCCACUUuuucaguaucaa
.(((((((.(((((((((....((((((.(.(((((............))))).).))))))....))))))))).))))))).

Structure

u       u         uuau      c u     uuuua 
 ugguacu ggagagugg    cccugu c guucg     a
 ||||||| |||||||||    |||||| | |||||      
 acuauga uuuUUCACC    GGGACA G UAAgc     u
a       c         UACU      U C     ugcau 

Annotation confidence Not enough data

Genome context

chr24: 42916520-42916603 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from eca-mir-487b

Mature eca-miR-487b

• Accession: MIMAT0013162
• Description: Equus caballus eca-miR-487b mature miRNA
• Sequence: 51 - AAUCGUACAGGGUCAUCCACUU - 72
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131