Stem-loop eca-mir-493b

Accession

MI0012906

Description

Equus caballus eca-mir-493b precursor miRNA

Literature search

1 open access papers mention eca-mir-493b
(2 sentences)

Sequence

79646 reads, 154.0 reads per million, 183 experiments

cuggccuccagggccUUGUACAUGGUAGGCUUUCAUUcauucguuugcacauucggUGAAGGUCUUCCGUGUGCCAGGcucugugccag
(((((...((((((((.((((((((.(((((((((((.................))))))))))).)))))))).)))))))).)))))

Structure

     cuc        U        U           cauucgu 
cuggc   cagggccU GUACAUGG AGGCUUUCAUU       u
|||||   |||||||| |||||||| |||||||||||       u
gaccg   gucucGGA CGUGUGCC UCUGGAAGUgg       g
     --u        C        U           cuuacac 

Annotation confidence High

Genome context

24: 43167633-43167721 [+]

Mature eca-miR-493b-5p

• Accession: MIMAT0051456
• Description: Equus caballus eca-miR-493b-5p mature miRNA
• Sequence: 16 - UUGUACAUGGUAGGCUUUCAUU - 37
• Evidence: not_experimental

Mature eca-miR-493b-3p

• Accession: MIMAT0013163
• Description: Equus caballus eca-miR-493b-3p mature miRNA
• Sequence: 57 - UGAAGGUCUUCCGUGUGCCAGG - 78
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131