Stem-loop eca-mir-495

Accession

MI0012908

Description

Equus caballus eca-mir-495 precursor miRNA

Sequence

108 reads, 16 reads per million, 1 experiments

uggucccugaaaagaaguugcccauguuauuuucgcuugauaugugacgAAACAAACAUGGUGCACUUCUUuuucgguauca
((((.((.((((((((((.(((((((((..((((((.........).)))))..))))))).)))))))))))).)).))))

Structure

    c  u          u  -       au     - uug 
uggu cc gaaaagaagu gc ccauguu  uuucg c   a
|||| || |||||||||| || |||||||  ||||| |   u
acua gg uuuUUCUUCA CG GGUACAA  AAAgc g   a
    u  c          -  U       AC     a ugu 

Annotation confidence Not enough data

Genome context

chr24: 42906084-42906165 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from eca-mir-495

Mature eca-miR-495

• Accession: MIMAT0013165
• Description: Equus caballus eca-miR-495 mature miRNA
• Sequence: 50 - AAACAAACAUGGUGCACUUCUU - 71
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131