Stem-loop eca-mir-656

Accession

MI0012915

Description

Equus caballus eca-mir-656 precursor miRNA

Literature search

1 open access papers mention eca-mir-656
(1 sentences)

Sequence

190 reads, 29 reads per million, 1 experiments

cugaaauagguugccugugagguguucacuuucuauacgaugAAUAUUAUACAGUCAACCUCUuuccggaaucgaauc
..((((.((((((.(((((.((((((((...((.....)))))))))).))))).)))))).))))............

Structure

----------cu    u      c     a        cuu  u 
            gaaa agguug cugug gguguuca   uc a
            |||| |||||| ||||| ||||||||   || u
            cuuU UCCAAC GACAU UUAUAAgu   ag a
cuaagcuaaggc    C      U     A        ---  c 

Annotation confidence Not enough data

Genome context

chr24: 42937011-42937088 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from eca-mir-656

Mature eca-miR-656

• Accession: MIMAT0013172
• Description: Equus caballus eca-miR-656 mature miRNA
• Sequence: 43 - AAUAUUAUACAGUCAACCUCU - 63
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131