Stem-loop eca-mir-199b

Accession

MI0012922

Description

Equus caballus eca-mir-199b precursor miRNA

Sequence

48713 reads, 7374 reads per million, 1 experiments

gucuaCCCAGUGUUUAGACUAUCUGUUCaggacucccaaauuguACAGUAGUCUGCACAUUGGUUAggc
(((((.(((((((.(((((((.((((.(((..........))).))))))))))).))))))).)))))

Structure

     C       U       U    U   gacu 
gucua CCAGUGU UAGACUA CUGU Cag    c
||||| ||||||| ||||||| |||| |||     
cggAU GGUUACA GUCUGAU GACA guu    c
     U       C       -    u   aaac 

Annotation confidence High

Genome context

chr25: 31553692-31553760 [-]

Mature eca-miR-199b-5p

• Accession: MIMAT0013780
• Description: Equus caballus eca-miR-199b-5p mature miRNA
• Sequence: 6 - CCCAGUGUUUAGACUAUCUGUUC - 28
• Evidence: not_experimental

Mature eca-miR-199b-3p

• Accession: MIMAT0013781
• Description: Equus caballus eca-miR-199b-3p mature miRNA
• Sequence: 45 - ACAGUAGUCUGCACAUUGGUUA - 66
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131