Stem-loop eca-mir-125b-2

Accession

MI0012926

Description

Equus caballus eca-mir-125b-2 precursor miRNA

Literature search

1 open access papers mention eca-mir-125b-2
(1 sentences)

Sequence

4555931 reads, 6214.0 reads per million, 227 experiments

ccuagUCCCUGAGACCCUAACUUGUGAgguauuuugguaacaucACAAGUCAGGCUCUUGGGACCUaggc
(((((((((.((((.(((.((((((((.((.........)).)))))))).))).)))))))).))))).

Structure

-     -    U    C   A        g  auu 
 ccuag UCCC GAGA CCU ACUUGUGA gu   u
 ||||| |||| |||| ||| |||||||| ||   u
 ggaUC AGGG UUCU GGA UGAACAcu ca   g
c     C    -    C   C        a  aug 

Annotation confidence High

Genome context

26: 16052911-16052980 [+]

Mature eca-miR-125b-5p

• Accession: MIMAT0012981
• Description: Equus caballus eca-miR-125b-5p mature miRNA
• Sequence: 6 - UCCCUGAGACCCUAACUUGUGA - 27
• Evidence: experimental ; Illumina [1]

Mature eca-miR-125b-2-3p

• Accession: MIMAT0061093
• Description: Equus caballus eca-miR-125b-2-3p mature miRNA
• Sequence: 45 - ACAAGUCAGGCUCUUGGGACCU - 66
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131