Stem-loop eca-mir-802

Accession

MI0012928

Description

Equus caballus eca-mir-802 precursor miRNA

Literature search

1 open access papers mention eca-mir-802
(1 sentences)

Sequence

1289 reads, 10.0 reads per million, 27 experiments

uucuauuauuugcaauCAGUAACAAAGAUUCAUCCUUGUguccaucaagcaacaAGGAGAAUCUUUGUCACUUAGUguaauuaauagcugcgc
..((((((.(((((...(((.((((((((((.(((((((((.......)).))))))))))))))))).)))...))))).))))))......

Structure

----uu      u     auC   A          A       -  cc 
      cuauua uugca   AGU ACAAAGAUUC UCCUUGU gu  a
      |||||| |||||   ||| |||||||||| ||||||| ||  u
      gauaau aaugU   UCA UGUUUCUAAG AGGAaca cg  c
cgcguc      u     GAU   C          -       a  aa 

Annotation confidence High

Genome context

26: 33335402-33335494 [+]

Mature eca-miR-802-5p

• Accession: MIMAT0013183
• Description: Equus caballus eca-miR-802-5p mature miRNA
• Sequence: 17 - CAGUAACAAAGAUUCAUCCUUGU - 39
• Evidence: not_experimental

Mature eca-miR-802-3p

• Accession: MIMAT0051474
• Description: Equus caballus eca-miR-802-3p mature miRNA
• Sequence: 55 - AGGAGAAUCUUUGUCACUUAGU - 76
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131