Stem-loop eca-mir-383

Accession

MI0012930

Description

Equus caballus eca-mir-383 precursor miRNA

Literature search

4 open access papers mention eca-mir-383
(12 sentences)

Sequence

2591 reads, 42.0 reads per million, 91 experiments

cuccucAGAUCAGAAGGUGAUUGUGGCUUuggguggauauuaaucagCCACAGCACUGCCUGGUCAGAAagag
(((.((.((((((..((((.((((((((...(((........)))))))))))))))..)))))).))..)))

Structure

   -c  A      AA    A        Uug   gga 
cuc  uc GAUCAG  GGUG UUGUGGCU   ggu   u
|||  || ||||||  |||| ||||||||   |||    
gag  AG CUGGUC  UCAC GACACCga   cua   a
   aA  A      CG    -        ---   auu 

Annotation confidence High

Genome context

27: 18220077-18220149 [-]

Mature eca-miR-383-5p

• Accession: MIMAT0013185
• Description: Equus caballus eca-miR-383-5p mature miRNA
• Sequence: 7 - AGAUCAGAAGGUGAUUGUGGCUU - 29
• Evidence: not_experimental

Mature eca-miR-383-3p

• Accession: MIMAT0051475
• Description: Equus caballus eca-miR-383-3p mature miRNA
• Sequence: 48 - CCACAGCACUGCCUGGUCAGAA - 69
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131