Stem-loop eca-let-7a-2

Accession

MI0012932

Description

Equus caballus eca-let-7a-2 precursor miRNA

Literature search

8 open access papers mention eca-let-7a-2
(34 sentences)

Sequence

19539234 reads, 41537.0 reads per million, 237 experiments

gggUGAGGUAGUAGGUUGUAUAGUUUggggcucugcccugcuaugggguaaCUAUACAAUCUACUGUCUUUCCU
(((.(((((((((((((((((((((((((((...)))))).........))))))))))))))))))))).)))

Structure

   U                     ---------      u 
ggg GAGGUAGUAGGUUGUAUAGUU         Uggggc  
||| |||||||||||||||||||||         |||||| c
UCC UUCUGUCAUCUAACAUAUCaa         gucccg  
   U                     ugggguauc      u 

Annotation confidence High

Genome context

28: 43148191-43148264 [+]

Mature eca-let-7a-2-5p

• Accession: MIMAT0012979
• Description: Equus caballus eca-let-7a-2-5p mature miRNA
• Sequence: 4 - UGAGGUAGUAGGUUGUAUAGUUU - 26
• Evidence: not_experimental

Mature eca-let-7a-2-3p

• Accession: MIMAT0061120
• Description: Equus caballus eca-let-7a-2-3p mature miRNA
• Sequence: 52 - CUAUACAAUCUACUGUCUUUCCU - 74
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131