Stem-loop eca-mir-664

Accession

MI0012940

Description

Equus caballus eca-mir-664 precursor miRNA

Literature search

1 open access papers mention eca-mir-664
(2 sentences)

Sequence

12407 reads, 23.0 reads per million, 152 experiments

gaacauugaaaCAGGCUAGGAAAACUGAUUGGAuagaaaauauuacucUAUUCAUUUAUCUCCUAGCCUACAaa
............(((((((((....(((.((((((((.........)))))))).)))..))))))))).....

Structure

gaacauugaaaC         AAAC   U        aaa 
            AGGCUAGGA    UGA UGGAuaga   u
            |||||||||    ||| ||||||||   a
            UCCGAUCCU    AUU ACUUAUcu   u
-------aaACA         --CU   U        cau 

Annotation confidence High

Genome context

30: 10799032-10799105 [-]

Mature eca-miR-664-5p

• Accession: MIMAT0051479
• Description: Equus caballus eca-miR-664-5p mature miRNA
• Sequence: 12 - CAGGCUAGGAAAACUGAUUGGA - 33
• Evidence: not_experimental

Mature eca-miR-664-3p

• Accession: MIMAT0013192
• Description: Equus caballus eca-miR-664-3p mature miRNA
• Sequence: 49 - UAUUCAUUUAUCUCCUAGCCUACA - 72
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131