Stem-loop eca-mir-1264

Accession

MI0012943

Description

Equus caballus eca-mir-1264 precursor miRNA

Sequence

8 reads, 1 reads per million, 1 experiments

agguccucaauaaguauuuguugaaagaauaaaugaaccaaCAAGUCUUAUUUGAGCACCUGUUaugug
((((.(((((((((.((((((((...............)))))))))))).))))).))))........

Structure

--------    c     -    u        aaagaa 
        aggu cucaa uaag auuuguug      u
        |||| ||||| |||| ||||||||      a
        UCCA GAGUU AUUC UGAACaac      a
guguaUUG    C     U    -        caagua 

Annotation confidence Not enough data

Genome context

chrX: 90707867-90707935 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-1264

Mature eca-miR-1264

• Accession: MIMAT0013195
• Description: Equus caballus eca-miR-1264 mature miRNA
• Sequence: 42 - CAAGUCUUAUUUGAGCACCUGUU - 64
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131