Stem-loop eca-mir-1912

Accession

MI0012948

Description

Equus caballus eca-mir-1912 precursor miRNA

Literature search

1 open access papers mention eca-mir-1912
(1 sentences)

Sequence

9 reads, 1 reads per million, 1 experiments

cucuaggaugugcucauugcaugggcuguguauauuuuuauucaaUACCCAGAGCGUGCAGUGUGAAcauaauagagauu
(((((..((((.(.(((((((((..(((.((((...........)))).)))..))))))))).).))))..)))))...

Structure

---     gg    g u         gg   u    auuu 
   cucua  augu c cauugcaug  cug guau    u
   |||||  |||| | |||||||||  ||| ||||    u
   gagau  uacA G GUGACGUGC  GAC CAUa    a
uua     aa    A U         GA   C    acuu 

Annotation confidence Not enough data

Genome context

chrX: 90706739-90706818 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-1912

Mature eca-miR-1912

• Accession: MIMAT0013201
• Description: Equus caballus eca-miR-1912 mature miRNA
• Sequence: 46 - UACCCAGAGCGUGCAGUGUGAA - 67
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131