Stem-loop eca-mir-363

Accession

MI0012958

Description

Equus caballus eca-mir-363 precursor miRNA

Literature search

1 open access papers mention eca-mir-363
(1 sentences)

Sequence

67394 reads, 473.0 reads per million, 209 experiments

uguuguCGGGUGGAUCACGAUGCAAUUUUGauuaguauaauaggagaaaAAUUGCACGGUAUCCAUCUGUAaacc
.(((..(((((((((..((.(((((((((..(((......)))....)))))))))))..)))))))))..))).

Structure

u   gu         CA  A         --Ga   gu 
 guu  CGGGUGGAU  CG UGCAAUUUU    uua  a
 |||  |||||||||  || |||||||||    |||   
 caa  GUCUACCUA  GC ACGUUAAaa    gau  u
c   AU         UG  -         agag   aa 

Annotation confidence High

Genome context

X: 110758365-110758439 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from eca-mir-363

Mature eca-miR-363-5p

• Accession: MIMAT0051487
• Description: Equus caballus eca-miR-363-5p mature miRNA
• Sequence: 7 - CGGGUGGAUCACGAUGCAAUUUUG - 30
• Evidence: not_experimental

Mature eca-miR-363-3p

• Accession: MIMAT0013212
• Description: Equus caballus eca-miR-363-3p mature miRNA
• Sequence: 50 - AAUUGCACGGUAUCCAUCUGUA - 71
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131