Stem-loop eca-mir-672

Accession

MI0012984

Description

Equus caballus eca-mir-672 precursor miRNA

Literature search

1 open access papers mention eca-mir-672
(2 sentences)

Sequence

gauggcgaucuagcccuuuaguuuUGAGGUUGGUGUACUGUGUGUGAguauauauauuuaucacacauaggcaauaucuuugaaagugagggugcacguc
(((....)))..((((((((.((((((((....(((.((((((((((..(.......)..)))))))))))))....)))))))).)))))).)).....

Structure

gauggcgaucua  -      g        UUGG   A          gu ua 
            gc ccuuua uuuUGAGG    UGU CUGUGUGUGA  a  u
            || |||||| ||||||||    ||| ||||||||||  |  a
            cg gggagu aaaguuuc    acg gauacacacu  u  u
-------cugca  u      g        uaua   -          au ua 

Annotation confidence Not enough data

Genome context

X: 59034630-59034729 [-]

Mature eca-miR-672-5p

• Accession: MIMAT0013242
• Description: Equus caballus eca-miR-672-5p mature miRNA
• Sequence: 25 - UGAGGUUGGUGUACUGUGUGUGA - 47
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131