Stem-loop bmo-mir-2854

Accession

MI0012995

Description

Bombyx mori bmo-mir-2854 precursor miRNA

Literature search

1 open access papers mention bmo-mir-2854
(1 sentences)

Sequence

8984 reads, 94.0 reads per million, 34 experiments

aagcccuuuuUCUUUCAAAACUGCAGGACGGccuuuauacguggccuuuuccaguuUACGCAGCUAAAUGAAGUGGUUUC
(((((((((..((....((((((.((((.((((.........)))))))).))))))....))......)))).))))).

Structure

-     -    ----uU  UUCA      C    C    uuu 
 aagcc cuuu      CU    AAACUG AGGA GGcc   a
 ||||| ||||      ||    |||||| |||| ||||   u
 UUUGG GAAG      GA    Uuugac uuuu ccgg   a
C     U    UAAAUC  CGCA      c    -    ugc 

Annotation confidence Low

Genome context

dbj|BSVE01000020.1|: 8541225-8541304 [-]

Mature bmo-miR-2854-5p

• Accession: MIMAT0013789
• Description: Bombyx mori bmo-miR-2854-5p mature miRNA
• Sequence: 11 - UCUUUCAAAACUGCAGGACGG - 31
• Evidence: not_experimental

Mature bmo-miR-2854-3p

• Accession: MIMAT0053210
• Description: Bombyx mori bmo-miR-2854-3p mature miRNA
• Sequence: 57 - UACGCAGCUAAAUGAAGUGGUUUC - 80
• Evidence: not_experimental

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148