miRBase entry: bmo-mir-2857

Stem-loop bmo-mir-2857


Accession
MI0013000
Description
Bombyx mori bmo-mir-2857 precursor miRNA


Sequence

606 reads, 17.0 reads per million, 26 experiments
cuguaugaccUGAUGGGACACAUACGGAACAUgcuggagcuaaagaagCUGAUCGUGGUCGUCUCACUGGAcauacagg
(((((((.((.(.((((((((.(((((..((.(((...........))))).))))))).))))))).)).))))))).

Structure
-       a  U A      -  A     AA  U   ggag 
 cuguaug cc G UGGGAC AC UACGG  CA gcu    c
 ||||||| || | |||||| || |||||  || |||    u
 gacauac GG C ACUCUG UG GUGCU  GU Cga    a
g       A  U -      C  -     -A  -   agaa 


Annotation confidence High
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Genome context
dbj|BSVE01000029.1|: 10647377-10647455 [-]

Database links

Mature bmo-miR-2857-5p

Accession MIMAT0013796
Description Bombyx mori bmo-miR-2857-5p mature miRNA
Sequence 11 - UGAUGGGACACAUACGGAACAU - 32
Evidence not_experimental

Mature bmo-miR-2857-3p

Accession MIMAT0053213
Description Bombyx mori bmo-miR-2857-3p mature miRNA
Sequence 49 - CUGAUCGUGGUCGUCUCACUGGA - 71
Evidence not_experimental

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148