miRBase entry: ola-mir-430a-1

Stem-loop ola-mir-430a-1

Accession

MI0013008

Description

Oryzias latipes ola-mir-430a-1 precursor miRNA

Literature search

3 open access papers mention ola-mir-430a-1
(9 sentences)

Sequence

ggacauaaagaugaccuugacacaggcacugacucuuucuucuuuguagUAAGUGCUACUUGUUGGGGUAuuuuuggugucc
((((((.((((..(((((((((..((((((.((((..........).))).))))))...)))))))))..)))).))))))

Structure

      a    ug         -ca      g   - uuuc 
ggacau aaga  accuugaca   ggcacu acu c    u
|||||| ||||  |||||||||   |||||| ||| |     
ccugug uuuu  UGGGGUUGU   UCGUGA Uga g    u
      g    uA         UCA      A   u uuuc

Annotation confidence Not enough data

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Genome context

4: 6743-6824 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ola-mir-430a-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ola-miR-430a

Accession	MIMAT0013804
Description	Oryzias latipes ola-miR-430a mature miRNA
Sequence	50 - UAAGUGCUACUUGUUGGGGUA - 70
Evidence	experimental in-situ [1], Northern [1]

References

PubMed ID: 19770025
Genomic organization and embryonic expression of miR-430 in medaka (Oryzias latipes): insights into the post-transcriptional gene regulation in early development
"Tani S, Kusakabe R, Naruse K, Sakamoto H, Inoue K"
"Gene (2010) 449:41-49