miRBase entry: ola-mir-430c-1

Stem-loop ola-mir-430c-1

Accession

MI0013009

Description

Oryzias latipes ola-mir-430c-1 precursor miRNA

Literature search

3 open access papers mention ola-mir-430c-1
(10 sentences)

Sequence

cagacauucagaugaccuuaacauaggcacugacuugaauaucuuugcagUAAGUGCUACAUGUUGGGGUAGucuuggugucuagc
.(((((((.((((.((((((((((.((((((.(((..((.....))..))).))))))..)))))))))).)))).)))))))...

Structure

--c       c    g          -a      g   ug  u 
   agacauu agau accuuaacau  ggcacu acu  aa a
   ||||||| |||| ||||||||||  |||||| |||  || u
   ucugugg ucuG UGGGGUUGUA  UCGUGA Uga  uu c
cga       u    A          CA      A   cg  u

Annotation confidence Not enough data

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Genome context

4: 6962-7047 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ola-mir-430c-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ola-miR-430c

Accession	MIMAT0013805
Description	Oryzias latipes ola-miR-430c mature miRNA
Sequence	51 - UAAGUGCUACAUGUUGGGGUAG - 72
Evidence	experimental in-situ [1], Northern [1]

References

PubMed ID: 19770025
Genomic organization and embryonic expression of miR-430 in medaka (Oryzias latipes): insights into the post-transcriptional gene regulation in early development
"Tani S, Kusakabe R, Naruse K, Sakamoto H, Inoue K"
"Gene (2010) 449:41-49