Stem-loop ola-mir-430c-5

Accession

MI0013019

Description

Oryzias latipes ola-mir-430c-5 precursor miRNA

Literature search

3 open access papers mention ola-mir-430c-5
(10 sentences)

Sequence

gucggacauucagaugaccuuaacauaggcacugacuugaauuucuuugcagUAAGUGCUACAUGUUGGGGUAGucuuggugucuagu
...(((((((.((((.((((((((((.((((((.(((..((.....))..))).))))))..)))))))))).)))).)))))))...

Structure

guc       c    g          -a      g   ug  u 
   ggacauu agau accuuaacau  ggcacu acu  aa u
   ||||||| |||| ||||||||||  |||||| |||  || u
   ucugugg ucuG UGGGGUUGUA  UCGUGA Uga  uu c
uga       u    A          CA      A   cg  u 

Annotation confidence Not enough data

Genome context

4: 2068709-2068796 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from ola-mir-430c-5

Mature ola-miR-430c

• Accession: MIMAT0013805
• Description: Oryzias latipes ola-miR-430c mature miRNA
• Sequence: 53 - UAAGUGCUACAUGUUGGGGUAG - 74
• Evidence: experimental ; in-situ [1], Northern [1]

References

1. PubMed ID: 19770025
   Genomic organization and embryonic expression of miR-430 in medaka (Oryzias latipes): insights into the post-transcriptional gene regulation in early development
   "Tani S, Kusakabe R, Naruse K, Sakamoto H, Inoue K"
   "Gene (2010) 449:41-49