Stem-loop ola-mir-430b-2

Accession

MI0013021

Description

Oryzias latipes ola-mir-430b-2 precursor miRNA

Literature search

3 open access papers mention ola-mir-430b-2
(12 sentences)

Sequence

15871 reads, 1173.0 reads per million, 41 experiments

ggacauaaagaugaCCUUGACACAGGCACUGACUCUUUCuucuuuguagUAAGUGCUACAUGUUGGGGUAAuuuugguguuc
((((((.(((((.(((((((((..((((((.((((..........).))).))))))...))))))))).))))).))))))

Structure

      a     g         -CA      G   - UUUC 
ggacau aagau aCCUUGACA   GGCACU ACU C    u
|||||| ||||| |||||||||   |||||| ||| |     
cuugug uuuuA UGGGGUUGU   UCGUGA Uga g    u
      g     A         ACA      A   u uuuc 

Annotation confidence Medium

Genome context

Unknown

Mature ola-miR-430b-2-5p

• Accession: MIMAT0057061
• Description: Oryzias latipes ola-miR-430b-2-5p mature miRNA
• Sequence: 15 - CCUUGACACAGGCACUGACUCUUUC - 39
• Evidence: experimental ; in-situ [1], Northern [1]

Mature ola-miR-430b-3p

• Accession: MIMAT0013806
• Description: Oryzias latipes ola-miR-430b-3p mature miRNA
• Sequence: 50 - UAAGUGCUACAUGUUGGGGUAA - 71
• Evidence: experimental ; in-situ [1], Northern [1]

References

1. PubMed ID: 19770025
   Genomic organization and embryonic expression of miR-430 in medaka (Oryzias latipes): insights into the post-transcriptional gene regulation in early development
   "Tani S, Kusakabe R, Naruse K, Sakamoto H, Inoue K"
   "Gene (2010) 449:41-49