Stem-loop ola-mir-430c-6

Accession

MI0013022

Description

Oryzias latipes ola-mir-430c-6 precursor miRNA

Literature search

3 open access papers mention ola-mir-430c-6
(11 sentences)

Sequence

33826 reads, 4332.0 reads per million, 46 experiments

aaaaaaauuuucaaacuuuuuccuuuugggccccnnnnnnnnnnaAUUUCUUUGCAGUAAGUGCUACAUGUUGGGGUAGUCUgggugucuagcaa
.....................(((.....(((((..........(((......(((.....))).....)))))))).....)))..........

Structure

aaaaaaauuuucaaacuuuuu   uuugg     nnnnnnnnnn   UUCUUU   G 
                     ccu     gcccc          aAU      GCA U
                     |||     |||||          |||      ||| A
                     ggg     UGGGG          UUG      CGU A
-----------aacgaucugu   UCUGA     ----------   -UACAU   G 

Annotation confidence Medium

Genome context

Unknown

Mature ola-miR-430c-6-5p

• Accession: MIMAT0061498
• Description: Oryzias latipes ola-miR-430c-6-5p mature miRNA
• Sequence: 46 - AUUUCUUUGCAGUAAGUG - 63
• Evidence: experimental ; in-situ [1], Northern [1]

Mature ola-miR-430c-3p

• Accession: MIMAT0013805
• Description: Oryzias latipes ola-miR-430c-3p mature miRNA
• Sequence: 62 - UGCUACAUGUUGGGGUAGUCU - 82
• Evidence: experimental ; in-situ [1], Northern [1]

References

1. PubMed ID: 19770025
   Genomic organization and embryonic expression of miR-430 in medaka (Oryzias latipes): insights into the post-transcriptional gene regulation in early development
   "Tani S, Kusakabe R, Naruse K, Sakamoto H, Inoue K"
   "Gene (2010) 449:41-49