Stem-loop ola-mir-430c-7

Accession

MI0013023

Description

Oryzias latipes ola-mir-430c-7 precursor miRNA

Literature search

3 open access papers mention ola-mir-430c-7
(11 sentences)

Sequence

35356 reads, 4419.0 reads per million, 46 experiments

aaaagaaauguguuucuccucuGCGGUACCUUGAAUUUCUuugcaguaagugcuacauguUGGGGUAGUCUUGGUGUCUAGCAA
...(((((....)))))....(((((((((..((...((((.(((............))).))))...))..)))).)).))).

Structure

aaaagaaauguguuucuccuc   -  -    UU  AUU    u   guaag 
                     uGC GG UACC  GA   UCUu gca     u
                     ||| || ||||  ||   |||| |||      
                     ACG UC GUGG  CU   GGGG ugu     g
--------------------A   A  U    UU  GAU    U   acauc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ola-miR-430c-7-5p

• Accession: MIMAT0057059
• Description: Oryzias latipes ola-miR-430c-7-5p mature miRNA
• Sequence: 23 - GCGGUACCUUGAAUUUCU - 40
• Evidence: experimental ; in-situ [1], Northern [1]

Mature ola-miR-430c-3p

• Accession: MIMAT0013805
• Description: Oryzias latipes ola-miR-430c-3p mature miRNA
• Sequence: 61 - UGGGGUAGUCUUGGUGUCUAGCAA - 84
• Evidence: experimental ; in-situ [1], Northern [1]

References

1. PubMed ID: 19770025
   Genomic organization and embryonic expression of miR-430 in medaka (Oryzias latipes): insights into the post-transcriptional gene regulation in early development
   "Tani S, Kusakabe R, Naruse K, Sakamoto H, Inoue K"
   "Gene (2010) 449:41-49