Stem-loop osa-MIR2867

Accession

MI0013029

Description

Oryza sativa osa-MIR2867 precursor miRNA

Literature search

1 open access papers mention osa-MIR2867
(1 sentences)

Sequence

15201 reads, 51.0 reads per million, 140 experiments

caauugacggcgUGUGCCAUCCCACACAUCCCGAUcauggcgugugacacaacuggaugugcgugccacgaccAGGACGUGUGGGAUGGCACAUGUUguca
....(((((((((((((((((((((((.(((.(.((.((((((((.(((........))))))))))).)).).))).)))))))))))))))))))))))

Structure

caau                       A   C A  a        g   caa 
    ugacggcgUGUGCCAUCCCACAC UCC G Uc uggcgugu aca   c
    ||||||||||||||||||||||| ||| | || |||||||| |||    
    acugUUGUACACGGUAGGGUGUG AGG c ag accgugcg ugu   u
----                       C   A c  c        -   agg 

Annotation confidence Medium

Genome context

11: 16277650-16277750 [+]

Mature osa-miR2867-5p

• Accession: MIMAT0013814
• Description: Oryza sativa osa-miR2867-5p mature miRNA
• Sequence: 13 - UGUGCCAUCCCACACAUCCCGAU - 35
• Evidence: experimental ; Illumina [1]

Mature osa-miR2867-3p

• Accession: MIMAT0020947
• Description: Oryza sativa osa-miR2867-3p mature miRNA
• Sequence: 74 - AGGACGUGUGGGAUGGCACAUGUU - 97
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 19903869
   Rice MicroRNA effector complexes and targets
   "Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y"
   "Plant Cell (2009) 21:3421-3435


2. PubMed ID: 21679406
   Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa
   Wei LQ, Yan LF, Wang T
   Genome Biol (2011) 12:R53