Accession
MI0013045
Description
Oryza sativa
osa-MIR2879 precursor miRNA
Literature search
2 open access papers mention osa-MIR2879
(2 sentences)
(2 sentences)
Sequence
3
reads,
4
reads per million, 2 experiments
ugcccagacgcgcucuggucauuauucuaacauauccggaucaacuggagagagaauuuuuagaaaggauguuugugcacuuguucaaccuguuuaacaaucacaaucagaucacaaaagauuauacugacacuaaauucaucugaucuaguacuuuauuuuuccgcauaaugccucuuguuuugacuacuugaucauuuuuagauguuugucaauggauggcacgaggguaaaagcgccauuuauaaaauuuaaucucuccaauugaGCCAGAUGUGUUAAAAUAAUGACCauaguaugu
.......(((.(((.(((((((((((.(((((((((.((.((((.(((((((((((((((..(((.((.(((((.(((.((((((((.((...................((((......))))..((.(((((((((......(((((.((((.((.........(((...)))..........)).)))).)))))..))))).)))).))....)).))).))))).))).))))))).)))..)))))))..)))))))).)))).)).))))))))).))))))))))).))).)))
.......(((.(((.(((((((((((.(((((((((.((.((((.(((((((((((((((..(((.((.(((((.(((.((((((((.((...................((((......))))..((.(((((((((......(((((.((((.((.........(((...)))..........)).)))).)))))..))))).)))).))....)).))).))))).))).))))))).)))..)))))))..)))))))).)))).)).))))))))).))))))))))).))).)))
Structure
ugcccag c c c c a c -- ua a a g a - a uguuuaacaaucacaaucagaucacaaaagauuau u - uucauc u c -uauuuuucc u
acg gcu uggucauuauu uaacauauc gg ucaa uggagaga gaauuuu gaa gg uguuu ugc cuugu uca cc ac gaca cuaaa ugauc agua uu gca
||| ||| ||||||||||| ||||||||| || |||| |||||||| ||||||| ||| || ||||| ||| ||||| ||| || || |||| ||||| ||||| |||| || ||| a
ugu uga aCCAGUAAUAA AUUGUGUAG CC aguu accucucu uuuaaaa uuu cc gcgaa aug gagca ggu gg ug uugu gauuu acuag ucau ag cgu
------- a u A A G a aa ua a - a g c a -------------------------------uaac u a ----uu u c uuuuguucuc a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Chr2: 18895908-18896208 [-]
Database links
Mature osa-miR2879
| Accession | MIMAT0013831 |
| Description | Oryza sativa osa-miR2879 mature miRNA |
| Sequence | 269 - GCCAGAUGUGUUAAAAUAAUGACC - 292 |
| Evidence |
experimental
Illumina [1] |
| Database links |
|
References
|
