miRBase entry: ssc-mir-206

Stem-loop ssc-mir-206

Sus scrofa ssc-mir-206 precursor miRNA
Gene family
MIPF0000038; mir-1

Literature search
30 open access papers mention ssc-mir-206
(191 sentences)


9 reads, 22 reads per million, 6 experiments

uucc     c                 cc     c gauu 
    cgagg cacaugcuucuuuauau  ccaua g    a
    ||||| |||||||||||||||||  ||||| |     
    gcucu GUGUGUGAAGGAAUGUA  GGUau c    c
aauu     A                 -A     - aguu 

Annotation confidence Not enough data
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Genome context
chr7: 52426445-52426524 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-mir-206
Name Accession Chromosome Start End Strand Confidence

Database links

Mature ssc-miR-206

Accession MIMAT0013864
Description Sus scrofa ssc-miR-206 mature miRNA
Evidence experimental
Illumina [1,3-4], cloned [2]


  1. PubMed ID: 19917043
    MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing
    "Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, Bendixen C, Thomsen B"
    "Anim Genet (2010) 41:159-168

  2. PubMed ID: 20180025
    Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue
    "Cho IS, Kim J, Seo HY, Lim DH, Hong JS, Park YH, Park DC, Hong KC, Whang KY, Lee YS"
    "Mol Biol Rep (2010) 37:3567-3574

  3. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328

  4. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100