miRBase entry: ssc-let-7a-1

Stem-loop ssc-let-7a-1

Sus scrofa ssc-let-7a-1 precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
50 open access papers mention ssc-let-7a-1
(164 sentences)


3118 reads, 1026 reads per million, 15 experiments

-      uU   G   U            Uuagaauug    aa 
 cccagg  GAG UAG AGGUUGUAUAGU         uauc  g
 ||||||  ||| ||| ||||||||||||         ||||   
 ggguuc  uuc auc uccgacauguca         auag  g
u      cu   g   c            ---------    ag 

Annotation confidence Not enough data
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Genome context
chr9: 54378059-54378138 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-let-7a-1
Name Accession Chromosome Start End Strand Confidence

Database links

Mature ssc-let-7a

Accession MIMAT0013865
Description Sus scrofa ssc-let-7a mature miRNA
Evidence experimental
Illumina [1-2]


  1. PubMed ID: 19917043
    MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing
    "Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, Bendixen C, Thomsen B"
    "Anim Genet (2010) 41:159-168

  2. PubMed ID: 20180025
    Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue
    "Cho IS, Kim J, Seo HY, Lim DH, Hong JS, Park YH, Park DC, Hong KC, Whang KY, Lee YS"
    "Mol Biol Rep (2010) 37:3567-3574

  3. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328

  4. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100