Accession
MI0013090
Description
Sus scrofa
ssc-mir-29a precursor miRNA
Literature search
32 open access papers mention ssc-mir-29a
(100 sentences)
(100 sentences)
Sequence
343
reads,
216
reads per million, 11 experiments
ccccuuagaggaugACUGAUUUCUUUUGGUGUUCAGagucaauauaauuuuCUAGCACCAUCUGAAAUCGGUUAuaaugauugggg
((((....(..((((((((((((...(((((((.((((...........)))))))))))...))))))))))))..)....))))
((((....(..((((((((((((...(((((((.((((...........)))))))))))...))))))))))))..)....))))
Structure
uuag gg UUU C ucaa
cccc a augACUGAUUUC UGGUGUU AGag u
|||| | |||||||||||| ||||||| |||| a
gggg u uAUUGGCUAAAG ACCACGA UCuu u
uuag aa UCU - uuaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr18: 19035225-19035310 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-mir-29a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ssc-miR-29a-3p
| Accession | MIMAT0013870 |
| Description | Sus scrofa ssc-miR-29a-3p mature miRNA |
| Sequence | 52 - CUAGCACCAUCUGAAAUCGGUUA - 74 |
| Evidence |
experimental
Illumina [1,3-4], cloned [2] |
Mature ssc-miR-29a-5p
| Accession | MIMAT0037364 |
| Description | Sus scrofa ssc-miR-29a-5p mature miRNA |
| Sequence | 15 - ACUGAUUUCUUUUGGUGUUCAG - 36 |
| Evidence |
experimental
Illumina [5], 454 [6] |
References
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