Stem-loop ssc-mir-128-2

Accession

MI0013094

Description

Sus scrofa ssc-mir-128-2 precursor miRNA

Literature search

9 open access papers mention ssc-mir-128-2
(14 sentences)

Sequence

4037681 reads, 5097.0 reads per million, 213 experiments

gcagugggaagGGGGGCCGAGGCACUGUCCGAGAgugaguagcaggucUCACAGUGAACCGGUCUCUUUcccuacugugu
((((((((.((((((((((...((((((..((((.(........).))))))))))...)))))))))).))))))))..

Structure

--        a          AGG      CC    g gag 
  gcaguggg agGGGGGCCG   CACUGU  GAGA u   u
  |||||||| ||||||||||   ||||||  |||| |    
  ugucaucc UUUCUCUGGC   GUGACA  CUcu g   a
ug        c          CAA      --    g acg 

Annotation confidence High

Genome context

chr13: 22859191-22859270 [+]

Mature ssc-miR-128-2-5p

• Accession: MIMAT0052580
• Description: Sus scrofa ssc-miR-128-2-5p mature miRNA
• Sequence: 12 - GGGGGCCGAGGCACUGUCCGAGA - 34
• Evidence: experimental ; Illumina [1-3]

Mature ssc-miR-128-3p

• Accession: MIMAT0002157
• Description: Sus scrofa ssc-miR-128-3p mature miRNA
• Sequence: 49 - UCACAGUGAACCGGUCUCUUU - 69
• Evidence: experimental ; Illumina [1-3]

References

1. PubMed ID: 19917043
   MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing
   "Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, Bendixen C, Thomsen B"
   "Anim Genet (2010) 41:159-168


2. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328


3. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100