miRBase entry: ssc-mir-486-1

Stem-loop ssc-mir-486-1

Sus scrofa ssc-mir-486-1 precursor miRNA
Gene family
MIPF0000220; mir-486

Literature search
12 open access papers mention ssc-mir-486-1
(25 sentences)


566 reads, 264 reads per million, 12 experiments

-----gcu        a    c       -  cucu     cc 
        ggggcuuc gggc agcucgg ac    gaccu  c
        |||||||| |||| ||||||| ||    |||||  u
        ucccgGAG CCCG UCGAGUC UG    CUggg  g
cgugucac        C    -       A  --UC     ca 

Annotation confidence Not enough data
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Genome context
chr17: 12191266-12191345 [-]

Database links

Mature ssc-miR-486

Accession MIMAT0013886
Description Sus scrofa ssc-miR-486 mature miRNA
Evidence experimental
Illumina [1-2]


  1. PubMed ID: 19917043
    MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing
    "Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, Bendixen C, Thomsen B"
    "Anim Genet (2010) 41:159-168

  2. PubMed ID: 20180025
    Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue
    "Cho IS, Kim J, Seo HY, Lim DH, Hong JS, Park YH, Park DC, Hong KC, Whang KY, Lee YS"
    "Mol Biol Rep (2010) 37:3567-3574

  3. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328

  4. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100