miRBase entry: sbi-MIR169p

Stem-loop sbi-MIR169p


Accession
MI0013254
Description
Sorghum bicolor sbi-MIR169p precursor miRNA MIR169
Gene
family?
RF03311; MIR169

Literature search
4 open access papers mention sbi-MIR169p
(23 sentences)

Sequence

uUAGCCAAGAAUGGCUUGCCUAucuccauuauuugguucaucagagggaccucugaucccucaugauggaugaaauguggaugauggcagcccuucuggcuaagu
(((((((.(((.((((.(((.((((((((.((((.((((((((((((((.......)))))).)))))))).))))))))).)))))))))).))))))))))..

Structure
--       A   U    U   U   -     u    g        -      cc 
  uUAGCCA GAA GGCU GCC Auc uccau auuu guucauca gaggga  u
  ||||||| ||| |||| ||| ||| ||||| |||| |||||||| ||||||  c
  aaucggu cuu ccga cgg uag aggug uaaa uagguagu cucccu  u
ug       -   c    -   -   u     -    g        a      ag 


Annotation confidence Not enough data
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Genome context
chr8: 1349656-1349760 [+]

Database links

Mature sbi-miR169p

Accession MIMAT0014043
Description Sorghum bicolor sbi-miR169p mature miRNA
Sequence 2 - UAGCCAAGAAUGGCUUGCCUA - 22
Evidence not_experimental

References

  1. PubMed ID: 19936050
    A genome-wide characterization of microRNA genes in maize
    Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
    PLoS Genet (2009) 5:e1000716