Stem-loop osa-MIR2923

Accession

MI0013265

Description

Oryza sativa osa-MIR2923 precursor miRNA

Sequence

uuacAGACAAAAAUAUAAAUAACAAAgaaauaaacgccuuguaccuacaguacaaagaauuggaaucaaguugggaaauauaagcaccauaccugccuauuaugaacauacuccagauacgaagggacaucuggauaacgcauuugagugucacuaucagguauaggugauuuuu
............((((...((((...((....((..(.((((((.....)))))).)..))....))..))))....))))...(((((((((((................(((((((..........)))))))..((((......))))......))))))).))))......

Structure

----------------------------------------------------------------------------------uuacAGACAAAA    -AAA    AAA  aaua  cg c      c 
                                                                                              AUAU    UAAC   ga    aa  c uuguac u
                                                                                              ||||    ||||   ||    ||  | |||||| a
                                                                                              uaua    guug   cu    uu  g aacaug c
uuuuuaguggauauggacuaucacugugaguuuacgcaauaggucuacagggaagcauagaccucauacaaguauuauccguccauaccacgaa    aagg    -aa  aagg  aa a      a 

Annotation confidence Not enough data

Genome context

Chr11: 21507096-21507270 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from osa-MIR2923

Mature osa-miR2923

• Accession: MIMAT0014054
• Description: Oryza sativa osa-miR2923 mature miRNA
• Sequence: 5 - AGACAAAAAUAUAAAUAACAAA - 26
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 20131478
   Cloning and validation of novel miRNA from basmati rice indicates cross talk between abiotic and biotic stresses
   "Sanan-Mishra N, Kumar V, Sopory SK, Mukherjee SK"
   "Mol Genet Genomics (2009) 282:463-474