Stem-loop osa-MIR2927

Accession

MI0013269

Description

Oryza sativa osa-MIR2927 precursor miRNA

Literature search

1 open access papers mention osa-MIR2927
(1 sentences)

Sequence

ugucgcggccggcgagcaugaagcugacgacgaugucgcggagguacuUGUCGUCGUCGAUGGAGCCCAUGaagcgugaaaggaggucgcugccgguggcagcgccgccaagcuuccgccguugucggaugaccuccgccgcgagcgcgu
...((((.(..((((((.....)))(((......)))(((((((......((((((.((((((.(.....(((((......((.((.(((((((...))))))))).))..)))))).)))))).).)))))))))))))))..))))).

Structure

ugu    g cg   agcaugaagcugacgacgauguc       uacuUG     - U      A CCCAU     gugaaa  a  u       g 
   cgcg c  gcg                       gcggagg      UCGUC G CGAUGG G     Gaagc      gg gg cgcugcc  
   |||| |  |||                       |||||||      ||||| | |||||| |     |||||      || || ||||||| g
   gcgc g  cgc                       cgccucc      aguag c guugcc c     cuucg      cc cc gcgacgg  
--u    - ag   -----------------------       ------     g u      g -----     ----aa  g  -       u 

Annotation confidence Not enough data

Genome context

Chr1: 37098081-37098230 [+]

Mature osa-miR2927

• Accession: MIMAT0014058
• Description: Oryza sativa osa-miR2927 mature miRNA
• Sequence: 49 - UGUCGUCGUCGAUGGAGCCCAUG - 71
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 20131478
   Cloning and validation of novel miRNA from basmati rice indicates cross talk between abiotic and biotic stresses
   "Sanan-Mishra N, Kumar V, Sopory SK, Mukherjee SK"
   "Mol Genet Genomics (2009) 282:463-474