miRBase entry: bma-lin-4

Stem-loop bma-lin-4


Accession
MI0013320
Description
Brugia malayi bma-lin-4 precursor miRNA

Literature search
3 open access papers mention bma-lin-4
(4 sentences)

Sequence

aaagaaagcuugcgaccuucUCCCUGAGACCUCUGCUGCGAcaguacguggcgucacagcaagaguaccucaggguccagguccuuucga
...(((((.....(((((...(((((((..((((((((.(((.((.....))))).)))).))))...)))))))...))))))))))..

Structure
aaa     cuugc     ucU       -AC    -    C   a  a 
   gaaag     gaccu   CCCUGAG   CUCU GCUG GAc gu c
   |||||     |||||   |||||||   |||| |||| ||| || g
   cuuuc     cugga   gggacuc   gaga cgac cug cg u
-ag     -----     ccu       cau    a    a   -  g 


Annotation confidence Not enough data
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Genome context
Bmal_v3_scaffold17: 230335-230424 [-]

Database links

Mature bma-lin-4

Accession MIMAT0014095
Description Brugia malayi bma-lin-4 mature miRNA
Sequence 21 - UCCCUGAGACCUCUGCUGCGA - 41
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 19874857
    Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
    "Poole CB, Davis PJ, Jin J, McReynolds LA"
    "Mol Biochem Parasitol (2010) 169:87-94

  2. PubMed ID: 24824352
    Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
    Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
    PLoS One (2014) 9:e96498