miRBase entry: bma-mir-236-1

Stem-loop bma-mir-236-1


Accession
MI0013347
Description
Brugia malayi bma-mir-236-1 precursor miRNA


Sequence

gaauggcugucgucuuaccugaacacuauuagagugucauaugaaauaucUAAUACUGUCAGGUAAUGACGAUugcc
....(((.((((((((((((((.((.(((((((...((....))....))))))).)))))))))).)))))).)))

Structure
gaau   u      -        a  c       -gug  a 
    ggc gucguc uuaccuga ca uauuaga    uc u
    ||| |||||| |||||||| || |||||||    ||  
    ccg UAGCAG AAUGGACU GU AUAAUcu    ag a
----   u      U        -  C       auaa  u 


Annotation confidence Not enough data
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Genome context
Bmal_v3_scaffold361: 33965-34041 [-]

Database links

Mature bma-miR-236

Accession MIMAT0014121
Description Brugia malayi bma-miR-236 mature miRNA
Sequence 51 - UAAUACUGUCAGGUAAUGACGAU - 73
Evidence not_experimental

References

  1. PubMed ID: 19874857
    Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
    "Poole CB, Davis PJ, Jin J, McReynolds LA"
    "Mol Biochem Parasitol (2010) 169:87-94

  2. PubMed ID: 24824352
    Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
    Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
    PLoS One (2014) 9:e96498