Stem-loop osa-MIR395x

Accession

MI0013350

Description

Oryza sativa osa-MIR395x precursor miRNA

Literature search

40 open access papers mention osa-MIR395x
(163 sentences)

Sequence

709 reads, 4.0 reads per million, 79 experiments

auuugguAUCGCCAUGAGUUCUCUUCAAACUcuucauacgacacuaauucaagugauguuGUGAAGUGUUUGGAGUAGCUCuuggugucaccaaac
.((((((..(((((.(((((..((((((((.(((((((((.((((......)))).)).))))))).)))))))).))))).)))))..)))))).

Structure

a      AU     U     CU        U       -  a    aa 
 uuuggu  CGCCA GAGUU  CUUCAAAC cuucaua cg cacu  u
 ||||||  ||||| |||||  |||||||| ||||||| || ||||   
 aaacca  guggu CUCGA  GAGGUUUG GAAGUGu gu guga  u
c      cu     u     -U        U       u  a    ac 

Annotation confidence Low

Genome context

4: 32623067-32623162 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from osa-MIR395x

Mature osa-miR395x-5p

• Accession: MIMAT0056160
• Description: Oryza sativa osa-miR395x-5p mature miRNA
• Sequence: 8 - AUCGCCAUGAGUUCUCUUCAAACU - 31
• Evidence: experimental ; unknown

Mature osa-miR395x-3p

• Accession: MIMAT0014124
• Description: Oryza sativa osa-miR395x-3p mature miRNA
• Sequence: 61 - GUGAAGUGUUUGGAGUAGCUC - 81
• Evidence: not_experimental

References

1. PubMed ID: 19951405
   Plant polycistronic precursors containing non-homologous microRNAs target transcripts encoding functionally related proteins
   Merchan F, Boualem A, Crespi M, Frugier F
   Genome Biol (2009) 10:R136