Stem-loop osa-MIR395y

Accession

MI0013351

Description

Oryza sativa osa-MIR395y precursor miRNA

Literature search

39 open access papers mention osa-MIR395y
(174 sentences)

Sequence

33 reads, 25 reads per million, 2 experiments

uggccccaggaguuccuugcaagcacuucacauagaacuucaguuacucucauacaacauugugauuuugagaagcuauuGUGAAGUGUUUGGGGGAACUCucggugcca
((((.((.((((((((((.((((((((((((((((...(((((((((..............)))))..))))...))).))))))))))))))))))))))).)).))))

Structure

    c  a          g             -   aac    --     ucucau 
uggc cc ggaguuccuu caagcacuucaca uag   uuca  guuac      a
|||| || |||||||||| ||||||||||||| |||   ||||  |||||       
accg gg uCUCAAGGGG GUUUGUGAAGUGu auc   gagu  uagug      c
    u  c          -             u   gaa    uu     uuacaa 

Annotation confidence Not enough data

Genome context

Chr8: 3299815-3299924 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from osa-MIR395y

Mature osa-miR395y

• Accession: MIMAT0014125
• Description: Oryza sativa osa-miR395y mature miRNA
• Sequence: 81 - GUGAAGUGUUUGGGGGAACUC - 101
• Evidence: not_experimental

References

1. PubMed ID: 19951405
   Plant polycistronic precursors containing non-homologous microRNAs target transcripts encoding functionally related proteins
   Merchan F, Boualem A, Crespi M, Frugier F
   Genome Biol (2009) 10:R136