Stem-loop api-mir-281

Accession

MI0013360

Description

Acyrthosiphon pisum api-mir-281 precursor miRNA

Literature search

3 open access papers mention api-mir-281
(5 sentences)

Sequence

9291 reads, 1635.0 reads per million, 6 experiments

AAGAGAGCUAUCCGUCGACAGUAuaauuuuuaacuacacUGUCAUGGAGUUGCUCUCUUUau
((((((((..(((((.((((((.((.........)).)))))))))))...))))))))...

Structure

---        -UA     C      A  auu 
   AAGAGAGC   UCCGU GACAGU ua   u
   ||||||||   ||||| |||||| ||   u
   UUCUCUCG   AGGUA CUGUca au   u
uaU        UUG     -      c  caa 

Annotation confidence High

Genome context

GL349875.1: 508928-508989 [+]

Mature api-miR-281-5p

• Accession: MIMAT0057264
• Description: Acyrthosiphon pisum api-miR-281-5p mature miRNA
• Sequence: 1 - AAGAGAGCUAUCCGUCGACAGUA - 23
• Evidence: not_experimental

Mature api-miR-281-3p

• Accession: MIMAT0014134
• Description: Acyrthosiphon pisum api-miR-281-3p mature miRNA
• Sequence: 40 - UGUCAUGGAGUUGCUCUCUUU - 60
• Evidence: not_experimental

References

1. Computational identification of microRNA homologs from Acyrthosiphon pisum (pea aphid)
   "Sathyamurthy G, Swamy NR"
   J Comp Intell Bioinf (2009) 2:109-119