Stem-loop ath-MIR2938

Accession

MI0013368

Description

Arabidopsis thaliana ath-MIR2938 precursor miRNA

Literature search

1 open access papers mention ath-MIR2938
(1 sentences)

Sequence

aaaaacuggaccccucuuaauuagaucucuaauuuguuuucuuucuucuccaaaauuugacaaagaaaagaauuGAUCUUUUGAGAGGGUUCCAGuuuuu
((((((((((.(((((((((..(((((......((.((((((((..((..........)).)))))))).))..))))).))))))))).))))))))))

Structure

          c         uu     ucuaau  g        cu  ucca 
aaaaacugga cccucuuaa  agauc      uu uuuucuuu  uc    a
|||||||||| |||||||||  |||||      || ||||||||  ||     
uuuuuGACCU GGGAGAGUU  UCUAG      aa aaaagaaa  ag    a
          U         -U     ----uu  g        -c  uuua 

Annotation confidence Not enough data

Genome context

chr5: 22251822-22251921 [-]

Mature ath-miR2938

• Accession: MIMAT0014142
• Description: Arabidopsis thaliana ath-miR2938 mature miRNA
• Sequence: 75 - GAUCUUUUGAGAGGGUUCCAG - 95
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20042113
   MicroRNA and tasiRNA diversity in mature pollen of Arabidopsis thaliana
   Grant-Downton R, Le Trionnaire G, Schmid R, Rodriguez-Enriquez J, Hafidh S, Mehdi S, Twell D, Dickinson H
   BMC Genomics (2009) 10:643