miRBase entry: rco-MIR156a

Stem-loop rco-MIR156a


Accession
MI0013370
Description
Ricinus communis rco-MIR156a precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
2 open access papers mention rco-MIR156a
(13 sentences)

Sequence

gggcgUGACAGAAGAGAGUGAGCACAcaugguuuucuugcauaucgauacuugaugcuuuuagcucugugugcucacccucuaucugucgcccaccu
((((..((((((((((.(((((((((((.((((.....(((..((((...)))))))....)))).))))))))))).)))).))))))))))....

Structure
----    gU      -    A           u    uucuu   ua    u 
    gggc  GACAGA AGAG GUGAGCACAca gguu     gca  ucga  
    ||||  |||||| |||| ||||||||||| ||||     |||  |||| a
    cccg  cugucu ucuc cacucgugugu ucga     cgu  aguu  
ucca    --      a    c           c    -uuuu   --    c 


Annotation confidence Not enough data
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Genome context
EQ973784.1: 261490-261586 [-]

Database links

Mature rco-miR156a

Accession MIMAT0014144
Description Ricinus communis rco-miR156a mature miRNA
Sequence 6 - UGACAGAAGAGAGUGAGCACA - 26
Evidence experimental
RT-PCR [1]

References

  1. PubMed ID: 19942686
    Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
    "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
    "Nucleic Acids Res (2010) 38:981-995