Stem-loop rco-MIR171a

Accession

MI0013398

Description

Ricinus communis rco-MIR171a precursor miRNA

Literature search

3 open access papers mention rco-MIR171a
(9 sentences)

Sequence

aaacgggauauugguccgguucaauaagaaaacagugcucaaaauguuaugggcccugcuuuuugaUUGAGCCGUGCCAAUAUCACGugcac
..(((.(((((((((.(((((((((.(((((.(((.(((((........))))).))).))))).))))))))).))))))))).)))....

Structure

--aa   g         c         a     a   u     aaa 
    acg gauauuggu cgguucaau agaaa cag gcuca   u
    ||| ||||||||| ||||||||| ||||| ||| |||||    
    uGC CUAUAACCG GCCGAGUUa uuuuu guc cgggu   g
cacg   A         U         g     c   c     auu 

Annotation confidence Not enough data

Genome context

EQ973932.1: 488002-488093 [-]

Mature rco-miR171a

• Accession: MIMAT0014172
• Description: Ricinus communis rco-miR171a mature miRNA
• Sequence: 67 - UUGAGCCGUGCCAAUAUCACG - 87
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995