Stem-loop rco-MIR319c

Accession

MI0013408

Description

Ricinus communis rco-MIR319c precursor miRNA

Literature search

2 open access papers mention rco-MIR319c
(4 sentences)

Sequence

uuaagagagcucucuucaguccacucaugggcgggcgaagguuuugaauuaucugccgacucauucauucaaacacacuagaaaagggagcauuaaagauagcugcuauugugaaugugugaaugaugcgggagauaaauuucauacuucucuucucugugcUUGGACUGAAGGGAGCUCCCUuuagc
..(((.(((((((((((((((((..((((((.(((.((((....((((((((((.(((..((((((((.((..((((........((.(((..........))).))..))))..)).))))))))..))).))))))..))))..)))).))).))))))..))))))))))))))))).)))....

Structure

--uu   a                 cu      c   c    guuu    --      g   ac        u  aa    cuagaaaa  g   auua 
    aag gagcucucuucagucca  cauggg ggg gaag    ugaa  uuaucu ccg  ucauucau ca  caca        gg agc    a
    ||| |||||||||||||||||  |||||| ||| ||||    ||||  |||||| |||  |||||||| ||  ||||        || |||     
    uUC CUCGAGGGAAGUCAGGU  gugucu uuc cuuc    acuu  aauaga ggc  aguaagug gu  gugu        uc ucg    a
cgau   C                 Uc      c   u    --au    ua      g   gu        u  aa    ------ua  g   auag 

Annotation confidence Not enough data

Genome context

EQ974605.1: 5923-6110 [-]

Mature rco-miR319c

• Accession: MIMAT0014182
• Description: Ricinus communis rco-miR319c mature miRNA
• Sequence: 163 - UUGGACUGAAGGGAGCUCCCU - 183
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995